Otherwise you can convert the SAM to sorted BAM, use the BAM to BED converter in BEDTools, and convert BED to GFF in Galaxy…


http://gmod.827538.n3.nabble.com/SAM-to-GFF-td2526192.html

It might be a little bit unusual to use the "generic feature format" 
(GFF) to show where your reads map....but strictly speaking mapped reads 
on a genome are 'features' as well. 

You can do it the following way: 

first use the "Convert SAM to interval" tool (NGS: SAM Tools), and use 
the "BED-to-GFF converter" (Convert Formats) 


or can simply convert in edit menu to BED, do not need to print full.


Gbrowse

Installing prereqs.

#fail